Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P00589 Lykurim 364.0967 365.1018 159
P00715 Loviride 350.0610 351.0678 159
P03958 Asperpyrone A 572.1410 573.1433 159
P05872 Formebolone 344.2031 345.2088 159
P08490 Torokonine 449.2231 450.2264 159
P10909 7-(3-((3-Formylphenoxy)methyl)-1,5-dimethyl-1H-pyrazol-4-yl)-3-(3-(naphthalen-1-yloxy)propyl)-1H-indole-2-carboxylic acid 573.2300 574.2360 159
P13378 (L-Threonyl)adenylate 448.1096 449.1147 159
P17048 761.2212 762.2314 159
P19069 353.5640 354.5707 159
P29235 467.7279 468.7315 159

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G196500 hypothetical protein NA 0
Glyma.20G196600 OLEO1 oleosin 1 AT4G25140:OLEO1:oleosin 1 0
Glyma.20G196700 hypothetical protein AT5G07490:AT5G07490:uncharacterized protein 0
Glyma.20G196900 SODB AT4G25100:FSD1:Fe superoxide dismutase 1 0
Glyma.20G197000 hypothetical protein AT4G13620:AT4G13620:Integrase-type DNA-binding superfamily protein 0
Glyma.20G197100 hypothetical protein NA 0
Glyma.20G197200 hypothetical protein NA 0
Glyma.20G197300 hypothetical protein AT3G23020:AT3G23020:Tetratricopeptide repeat (TPR)-like superfamily protein 0
Glyma.20G197400 hypothetical protein NA 0
Glyma.20G197500 hypothetical protein AT3G61420:AT3G61420:BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)__AT1G55750:AT1G55750:BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) 0