Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55501 TRIETHYLENE GLYCOL 150.0886 151.0965 —
P55504 242.8763 243.8834 —
P55505 278.8958 279.9028 —
P55506 Cycloaspeptide D 627.2976 628.3046 —
P55509 Insularine 2beta-N-oxide 636.2833 637.2873 —
P55518 116.9519 117.9590 —
P55519 4-Chloro-7-nitrobenzofurazan 198.9770 199.9844 —
P55520 236.8846 237.8918 —
P55521 Lupinine 169.1454 170.1523 —
P55523 Cefapime 462.1075 463.1113 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G196500 hypothetical protein NA 0
Glyma.20G196600 OLEO1 oleosin 1 AT4G25140:OLEO1:oleosin 1 0
Glyma.20G196700 hypothetical protein AT5G07490:AT5G07490:uncharacterized protein 0
Glyma.20G196900 SODB AT4G25100:FSD1:Fe superoxide dismutase 1 0
Glyma.20G197000 hypothetical protein AT4G13620:AT4G13620:Integrase-type DNA-binding superfamily protein 0
Glyma.20G197100 hypothetical protein NA 0
Glyma.20G197200 hypothetical protein NA 0
Glyma.20G197300 hypothetical protein AT3G23020:AT3G23020:Tetratricopeptide repeat (TPR)-like superfamily protein 0
Glyma.20G197400 hypothetical protein NA 0
Glyma.20G197500 hypothetical protein AT3G61420:AT3G61420:BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)__AT1G55750:AT1G55750:BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) 0