Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P04657 Isopongaflavone 334.1227 335.1294 188
P06843 Leptanthin 286.0773 287.0845 188
P11295 3,5-Dihydroxyphenyl 1-O-(6-O-galloyl-beta-D-glucopyranoside) 440.0962 441.1006 188
P21336 Quercetin 3-(6''-ethylglucuronide) 506.1066 507.1119 188
P29799 Chaetoxanthone C 390.0909 391.0987 188
P31693 589.2530 590.2594 188
P33310 Ternatin C5 874.1936 875.2042 188
P46593 Chrotacumine B 387.1647 388.1710 188
P47225 Planktocyclin 800.4334 801.4318 188
P04106 N-Trifluoroacetyladriamycinol 641.1784 642.1889 187

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G196500 hypothetical protein NA 0
Glyma.20G196600 OLEO1 oleosin 1 AT4G25140:OLEO1:oleosin 1 0
Glyma.20G196700 hypothetical protein AT5G07490:AT5G07490:uncharacterized protein 0
Glyma.20G196900 SODB AT4G25100:FSD1:Fe superoxide dismutase 1 0
Glyma.20G197000 hypothetical protein AT4G13620:AT4G13620:Integrase-type DNA-binding superfamily protein 0
Glyma.20G197100 hypothetical protein NA 0
Glyma.20G197200 hypothetical protein NA 0
Glyma.20G197300 hypothetical protein AT3G23020:AT3G23020:Tetratricopeptide repeat (TPR)-like superfamily protein 0
Glyma.20G197400 hypothetical protein NA 0
Glyma.20G197500 hypothetical protein AT3G61420:AT3G61420:BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)__AT1G55750:AT1G55750:BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) 0