Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P30783 CDP-DG(18:1(12Z)-2OH(9,10)/a-17:0) 1025.5353 1026.5433 159
P49619 Rapisterone 508.3340 509.3432 159
P54107 N-(Sulfonatooxy)prop-2-enimidothioate 196.9815 197.9888 159
P00722 142.1090 143.1161 158
P02515 2,5-Dimethyl-3-furanthiol acetate 170.0374 171.0455 158
P05070 Flunoxaprofen 285.0822 286.0878 158
P08637 Melrosin A 476.1729 477.1829 158
P09407 Fura-2 641.1573 642.1634 158
P09940 Serdexmethylphenidate 499.1991 500.2024 158
P10501 Cyamemazine 323.1472 324.1527 158

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G192300 hypothetical protein AT3G10500:NAC053:NAC domain containing protein 53__AT5G04410:NAC2:NAC domain containing protein 2 0
Glyma.20G192400 hypothetical protein NA 0
Glyma.20G192500 hypothetical protein AT3G10490:NAC052:NAC domain containing protein 52__AT3G10480:NAC050:NAC domain containing protein 50 0
Glyma.20G192600 hypothetical protein NA 0
Glyma.20G192800 hypothetical protein NA 0
Glyma.20G192900 hypothetical protein NA 0
Glyma.20G193000 hypothetical protein AT3G10470:AT3G10470:C2H2-type zinc finger family protein 0
Glyma.20G193100 hypothetical protein NA 0
Glyma.20G193200 hypothetical protein NA 0
Glyma.20G193300 hypothetical protein NA 0