Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P10655 888.1522 889.1623 169
P11117 431.7028 432.7092 169
P12129 408.9855 409.9918 169
P22795 Rhodiolinin 480.1040 481.1141 169
P24976 (20R,22R)-20-O,22-O-(5'-hydroxy-methyl)-furfurylidene-2beta,3beta,25-trihydroxy-14beta-methyl-18-nor-5beta-cholesta-7,12-dien-6-one 570.3155 571.3229 169
P25855 Israpafant 488.1811 489.1888 169
P32815 826.3427 827.3454 169
P46002 Albothricin 500.2704 501.2788 169
P53391 NA 30851A 670.2612 671.2685 169
P06861 Idrapril 258.1185 259.1256 168

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G192300 hypothetical protein AT3G10500:NAC053:NAC domain containing protein 53__AT5G04410:NAC2:NAC domain containing protein 2 0
Glyma.20G192400 hypothetical protein NA 0
Glyma.20G192500 hypothetical protein AT3G10490:NAC052:NAC domain containing protein 52__AT3G10480:NAC050:NAC domain containing protein 50 0
Glyma.20G192600 hypothetical protein NA 0
Glyma.20G192800 hypothetical protein NA 0
Glyma.20G192900 hypothetical protein NA 0
Glyma.20G193000 hypothetical protein AT3G10470:AT3G10470:C2H2-type zinc finger family protein 0
Glyma.20G193100 hypothetical protein NA 0
Glyma.20G193200 hypothetical protein NA 0
Glyma.20G193300 hypothetical protein NA 0