Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P16525 Isoginkgetin 7-O-beta-D-glucopyranoside 728.1731 729.1824 115
P19420 Homoneoharringtonine 549.2405 550.2453 115
P19653 750.2553 751.2633 115
P19780 Lappaol D 568.2302 569.2391 115
P20216 Histidylhistidine 292.1273 293.1352 115
P21207 Dapriamicin A 511.1949 512.2013 115
P22565 Androstane-3,17-diol 17-sulfate 372.1984 373.2057 115
P22629 N-4-[2(R)-Amino-3-mercaptopropyl]amino-2-naphthylbenzoyl-(L)-leucine, TFA 465.2079 466.2159 115
P22895 FD 212 268.1299 269.1362 115
P23137 Fentrazamide 349.1306 350.1360 115

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G192300 hypothetical protein AT3G10500:NAC053:NAC domain containing protein 53__AT5G04410:NAC2:NAC domain containing protein 2 0
Glyma.20G192400 hypothetical protein NA 0
Glyma.20G192500 hypothetical protein AT3G10490:NAC052:NAC domain containing protein 52__AT3G10480:NAC050:NAC domain containing protein 50 0
Glyma.20G192600 hypothetical protein NA 0
Glyma.20G192800 hypothetical protein NA 0
Glyma.20G192900 hypothetical protein NA 0
Glyma.20G193000 hypothetical protein AT3G10470:AT3G10470:C2H2-type zinc finger family protein 0
Glyma.20G193100 hypothetical protein NA 0
Glyma.20G193200 hypothetical protein NA 0
Glyma.20G193300 hypothetical protein NA 0