Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P07539 Quercetin 3-(6''-ethylglucuronide) 506.1114 507.1169 134
P07584 Xanthopappin A 172.0347 173.0429 134
P07886 3-Demethylsimmondsin 2'-(Z)-ferulate 537.1879 538.1922 134
P20347 Girolline 190.0621 191.0692 134
P20702 2-(Methylenebutyl)-cyclopropane 110.1086 111.1160 134
P23823 Tubastrindole G 509.2142 510.2207 134
P26981 Leandreanin B 774.2748 775.2841 134
P30845 methyl 9S,11R,15S,18-tetraacetoxy-5Z,13E-prostadienoate 552.2877 553.2929 134
P32272 8-Azaguanine 152.0460 153.0536 134
P33627 Vomifoliol 9-[glucosyl-(1->4)-xylosyl-(1->6)-glucoside] 680.2888 681.2956 134

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G190100 hypothetical protein AT5G04490:VTE5:phytol kinase 1 VTE5 0
Glyma.20G190200 hypothetical protein AT3G10530:AT3G10530:Transducin/WD40 repeat-like superfamily protein 0
Glyma.20G190300 hypothetical protein AT3G52190:PHF1:phosphate transporter traffic facilitator1 0
Glyma.20G190400 hypothetical protein AT3G52180:SEX4:dual specificity protein phosphatase (DsPTP1) family protein 0
Glyma.20G190600 hypothetical protein NA 0
Glyma.20G190700 hypothetical protein NA 0
Glyma.20G190800 hypothetical protein NA 0
Glyma.20G190900 hypothetical protein AT1G62020:AT1G62020:Coatomer, alpha subunit 0
Glyma.20G191000 hypothetical protein AT4G14590:emb2739:embryo defective 2739 0
Glyma.20G191100 hypothetical protein NA 0