Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09175 N-((6-Methyl-5-oxo-3-thiomorpholinyl)carbonyl)-L-histidyl-L-proline 409.1415 410.1489 174
P13516 17-AAG 585.3021 586.3065 174
P32078 PA(20:4(6Z,8E,10E,14Z)-2OH(5S,12R)/18:4(6Z,9Z,12Z,15Z)) 748.4353 749.4432 174
P36912 Rhodojaponin IV 454.2533 455.2601 174
P39839 223.1261 224.1336 174
P40128 O-Demethylpuromycin 457.2031 458.2087 174
P42303 Swietenitin C 814.3052 815.3111 174
P43471 Huperzine T 277.1674 278.1738 174
P44943 Asparagoside C 740.4321 741.4375 174
P50462 Fungicide K 99-5278B 564.3682 565.3728 174

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G190100 hypothetical protein AT5G04490:VTE5:phytol kinase 1 VTE5 0
Glyma.20G190200 hypothetical protein AT3G10530:AT3G10530:Transducin/WD40 repeat-like superfamily protein 0
Glyma.20G190300 hypothetical protein AT3G52190:PHF1:phosphate transporter traffic facilitator1 0
Glyma.20G190400 hypothetical protein AT3G52180:SEX4:dual specificity protein phosphatase (DsPTP1) family protein 0
Glyma.20G190600 hypothetical protein NA 0
Glyma.20G190700 hypothetical protein NA 0
Glyma.20G190800 hypothetical protein NA 0
Glyma.20G190900 hypothetical protein AT1G62020:AT1G62020:Coatomer, alpha subunit 0
Glyma.20G191000 hypothetical protein AT4G14590:emb2739:embryo defective 2739 0
Glyma.20G191100 hypothetical protein NA 0