Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P35361 17beta-Amino-5alpha-androstan-11beta-ol 291.2619 292.2697 127
P37611 832.3435 833.3498 127
P38636 90.0465 91.0536 127
P41383 5,6,7,8-Tetrahydro-5-isopropyl-3-methyl-2-naphthol 204.1496 205.1562 127
P44423 Albopilosin B 394.2331 395.2422 127
P47420 Ethanol, 2-(pentyl(5-(1-piperidinyl)(1,2,4)triazolo(1,5-a)pyrimidin-7-yl)amino)- 332.2325 333.2379 127
P52535 Dehydromonocrotaline 323.1351 324.1443 127
P01445 Clavam-2-carboxylate 157.0356 158.0429 126
P08253 1-((1-(4-Chlorophenyl)-1H-1,2,3-triazol-4-yl)methyl)-4-phenylpiperazine 353.1426 354.1514 126
P08711 Xylogranatinin 192.0516 193.0593 126

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G190100 hypothetical protein AT5G04490:VTE5:phytol kinase 1 VTE5 0
Glyma.20G190200 hypothetical protein AT3G10530:AT3G10530:Transducin/WD40 repeat-like superfamily protein 0
Glyma.20G190300 hypothetical protein AT3G52190:PHF1:phosphate transporter traffic facilitator1 0
Glyma.20G190400 hypothetical protein AT3G52180:SEX4:dual specificity protein phosphatase (DsPTP1) family protein 0
Glyma.20G190600 hypothetical protein NA 0
Glyma.20G190700 hypothetical protein NA 0
Glyma.20G190800 hypothetical protein NA 0
Glyma.20G190900 hypothetical protein AT1G62020:AT1G62020:Coatomer, alpha subunit 0
Glyma.20G191000 hypothetical protein AT4G14590:emb2739:embryo defective 2739 0
Glyma.20G191100 hypothetical protein NA 0