Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54679 357.7333 358.7417 —
P54683 Neoacrimarine D 635.2497 636.2567 —
P54688 2,7-Dideacetyltaxuspine X 682.2954 683.3041 —
P54690 2-(Dimethylamino)acetonitrile 84.0681 85.0754 —
P54692 200.9661 201.9741 —
P54697 160.9610 161.9683 —
P54698 7-O-Acetylpseurata C 432.2164 433.2204 —
P54703 695.3327 696.3404 —
P54706 663.2964 664.3060 —
P54707 Briarlide E 636.2757 637.2796 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G188900 hypothetical protein NA 0
Glyma.20G189000 hypothetical protein NA 0
Glyma.20G189100 hypothetical protein AT5G04540:MTM2:Myotubularin-like phosphatases II superfamily 0
Glyma.20G189200 hypothetical protein AT5G04550:AT5G04550:type-1 restriction enzyme mjaxp r protein (DUF668) 0
Glyma.20G189300 hypothetical protein NA 0
Glyma.20G189400 hypothetical protein NA 0
Glyma.20G189500 hypothetical protein AT3G52200:LTA3:Dihydrolipoamide acetyltransferase, long form protein 0
Glyma.20G189600 hypothetical protein NA 0
Glyma.20G189800 hypothetical protein NA 0
Glyma.20G190000 hypothetical protein AT5G04510:PDK1:3'-phosphoinositide-dependent protein kinase 1 0