Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P03801 Lapathoside D 634.1878 635.1980 147
P04489 Antibiotic AA 57 312.0761 313.0854 147
P10181 Genistein 7,4'-bis(O-glucosylapioside) 858.2449 859.2537 147
P12065 Cynanoneside A 314.1006 315.1069 147
P12164 Guvacoline 141.0781 142.0853 147
P13121 Callysponginol sulfate A 458.2712 459.2756 147
P22139 27-O-Demethyl-25-O-desacetylrifamycin SV 641.2830 642.2916 147
P22588 6-Carboxymethyl-3,5-dimethyl-4-hydroxypyridin-2-ol 197.0666 198.0749 147
P27228 957.3498 958.3567 147
P30187 Mpomeovt 1074.4928 1075.4968 147

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G187800 hypothetical protein NA 0
Glyma.20G187900 hypothetical protein NA 0
Glyma.20G188000 hypothetical protein AT3G10570:CYP77A6:cytochrome P450, family 77, subfamily A, polypeptide 6__AT5G04630:CYP77A9:cytochrome P450, family 77, subfamily A, polypeptide 9__AT3G10560:UNE9:Cytochrome P450 superfamily protein 0
Glyma.20G188100 hypothetical protein NA 0
Glyma.20G188200 hypothetical protein NA 0
Glyma.20G188300 hypothetical protein AT5G04560:DME:HhH-GPD base excision DNA repair family protein 0
Glyma.20G188500 hypothetical protein AT5G16300:AT5G16300:Vps51/Vps67 family (components of vesicular transport) protein 0
Glyma.20G188600 hypothetical protein NA 0
Glyma.20G188700 hypothetical protein NA 0
Glyma.20G188800 hypothetical protein NA 0