Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P23848 475.0555 476.0632 133
P25001 Leukotriene C5 623.2954 624.3016 133
P29543 Aristoloterpenate II 527.1907 528.1979 133
P30895 1-(6Z,9Z,12Z-octadecatrienoyl)-glycero-3-phosphoserine 519.2627 520.2710 133
P30962 Spongothymidine 258.0832 259.0902 133
P37482 Pomalidomide 273.0701 274.0768 133
P39497 alpha-Zearalenol 320.1584 321.1667 133
P42354 1044.2354 1045.2401 133
P42759 Resorcinol 110.0355 111.0433 133
P45429 631.2839 632.2928 133

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G184400 hypothetical protein AT2G47320:AT2G47320:Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0
Glyma.20G184500 hypothetical protein NA 0
Glyma.20G184600 hypothetical protein AT1G04560:AT1G04560:AWPM-19-like family protein 0
Glyma.20G184700 hypothetical protein NA 0
Glyma.20G184800 hypothetical protein NA 0
Glyma.20G184900 hypothetical protein AT3G25620:ABCG21:ABC-2 type transporter family protein 0
Glyma.20G185000 hypothetical protein NA 0
Glyma.20G185100 hypothetical protein NA 0
Glyma.20G185200 hypothetical protein NA 0
Glyma.20G185300 hypothetical protein AT3G25690:CHUP1:Hydroxyproline-rich glycoprotein family protein 0