Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P23848 475.0555 476.0632 133
P25001 Leukotriene C5 623.2954 624.3016 133
P29543 Aristoloterpenate II 527.1907 528.1979 133
P30895 1-(6Z,9Z,12Z-octadecatrienoyl)-glycero-3-phosphoserine 519.2627 520.2710 133
P30962 Spongothymidine 258.0832 259.0902 133
P37482 Pomalidomide 273.0701 274.0768 133
P39497 alpha-Zearalenol 320.1584 321.1667 133
P42354 1044.2354 1045.2401 133
P42759 Resorcinol 110.0355 111.0433 133
P45429 631.2839 632.2928 133

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G182400 hypothetical protein AT3G54840:ARA6:Ras-related small GTP-binding family protein 0
Glyma.20G182500 hypothetical protein NA 0
Glyma.20G182600 hypothetical protein AT3G54850:PUB14:plant U-box 14 0
Glyma.20G182700 hypothetical protein NA 0
Glyma.20G182800 hypothetical protein AT3G10380:SEC8:subunit of exocyst complex 8 0
Glyma.20G182900 hypothetical protein NA 0
Glyma.20G183000 hypothetical protein AT2G39140:SVR1:pseudouridine synthase family protein 0
Glyma.20G183100 hypothetical protein AT3G10370:SDP6:FAD-dependent oxidoreductase family protein 0
Glyma.20G183200 hypothetical protein AT2G39170:AT2G39170:MEF2BNB-like protein 0
Glyma.20G183300 hypothetical protein NA 0