Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54876 603.2250 604.2295 —
P54879 531.3880 532.3948 —
P54880 360.2884 361.2940 —
P54883 N-Linoleoyl Valine 379.3058 380.3127 —
P54893 606.8184 607.8238 —
P54895 844.0016 845.0097 —
P54899 Ligurobustoside O 622.2595 623.2642 —
P54900 606.0010 607.0054 —
P54902 NADPH 745.0835 746.0902 —
P54903 606.8463 607.8539 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G182400 hypothetical protein AT3G54840:ARA6:Ras-related small GTP-binding family protein 0
Glyma.20G182500 hypothetical protein NA 0
Glyma.20G182600 hypothetical protein AT3G54850:PUB14:plant U-box 14 0
Glyma.20G182700 hypothetical protein NA 0
Glyma.20G182800 hypothetical protein AT3G10380:SEC8:subunit of exocyst complex 8 0
Glyma.20G182900 hypothetical protein NA 0
Glyma.20G183000 hypothetical protein AT2G39140:SVR1:pseudouridine synthase family protein 0
Glyma.20G183100 hypothetical protein AT3G10370:SDP6:FAD-dependent oxidoreductase family protein 0
Glyma.20G183200 hypothetical protein AT2G39170:AT2G39170:MEF2BNB-like protein 0
Glyma.20G183300 hypothetical protein NA 0