Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P18070 Cymbidine A 949.4154 950.4239 236
P25621 Pseudoanisatin 298.1384 299.1467 236
P47300 534.7868 535.7927 236
P31222 Sufotidine 421.2096 422.2177 235
P03976 Dilmapimod 456.1404 457.1517 234
P53033 7-Oxononane-1,1,9-tricarbaldehyde 226.1222 227.1285 234
P05631 Trimethyl orthoacetate 120.0775 121.0848 233
P13790 317.1926 318.1997 233
P23295 3beta-(4-Iodophenyl)tropan-2beta-carboxylic acid isopropyl ester 413.0800 414.0838 233
P11101 L-beta-aspartyl-L-phenylalanine 280.1044 281.1122 231

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G178800 hypothetical protein AT2G39200:MLO12:Seven transmembrane MLO family protein 0
Glyma.20G178900 hypothetical protein NA 0
Glyma.20G179100 hypothetical protein AT2G39190:ATATH8:Protein kinase superfamily protein 0
Glyma.20G179200 hypothetical protein NA 0
Glyma.20G179300 hypothetical protein NA 0
Glyma.20G179400 hypothetical protein AT2G28880:emb1997:para-aminobenzoate (PABA) synthase family protein 0
Glyma.20G179500 hypothetical protein AT1G48850:EMB1144:chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase 0
Glyma.20G179700 hypothetical protein AT3G54820:PIP2;5:plasma membrane intrinsic protein 2;5 0
Glyma.20G179800 hypothetical protein AT2G39000:AT2G39000:Acyl-CoA N-acyltransferases (NAT) superfamily protein 0
Glyma.20G179900 hypothetical protein AT5G17530:AT5G17530:phosphoglucosamine mutase family protein 0