Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09221 125.0522 126.0595 128
P09564 Penciclovir 253.1160 254.1232 128
P10493 2-Oxoquazepam 370.0498 371.0587 128
P12417 Chlorantene B 293.1261 294.1321 128
P14122 Ethylbenzene 106.0770 107.0848 128
P14373 Syncarpamide 457.1946 458.2002 128
P23258 Rel-5-hydroxy-7,4'-dimethoxy-2''S-(2,4,5-trimethoxy-E-styryl)-tetrahydrofuro[4''R,5''R:2,3]flavanonol 550.1803 551.1876 128
P28437 Fuscinarin 264.0988 265.1054 128
P28624 Hedychilactone A 318.2223 319.2304 128
P28829 O-Methyltubulosine 489.2945 490.2987 128

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G178800 hypothetical protein AT2G39200:MLO12:Seven transmembrane MLO family protein 0
Glyma.20G178900 hypothetical protein NA 0
Glyma.20G179100 hypothetical protein AT2G39190:ATATH8:Protein kinase superfamily protein 0
Glyma.20G179200 hypothetical protein NA 0
Glyma.20G179300 hypothetical protein NA 0
Glyma.20G179400 hypothetical protein AT2G28880:emb1997:para-aminobenzoate (PABA) synthase family protein 0
Glyma.20G179500 hypothetical protein AT1G48850:EMB1144:chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase 0
Glyma.20G179700 hypothetical protein AT3G54820:PIP2;5:plasma membrane intrinsic protein 2;5 0
Glyma.20G179800 hypothetical protein AT2G39000:AT2G39000:Acyl-CoA N-acyltransferases (NAT) superfamily protein 0
Glyma.20G179900 hypothetical protein AT5G17530:AT5G17530:phosphoglucosamine mutase family protein 0