Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09654 2-Hydroxyfelbamate 254.0901 255.0955 141
P16359 197.1097 198.1162 141
P17680 Glycosmisic acid 372.1197 373.1259 141
P21082 (2S)-2-Amino-4-sulfanylbutanal 119.0422 120.0490 141
P26911 1-(9Z-octadecenoyl)-2-(4,7-dioxo-5E-heptenoyl)-sn-glycero-3-phospho-(1'-myo-inositol) 736.3391 737.3480 141
P27176 FD 212 268.1287 269.1370 141
P27832 Mabiogenin 3-[rhamnosyl-(1->6)-glucoside] 796.4504 797.4579 141
P29828 4'-Oxonebramine 304.1730 305.1785 141
P32281 Aristolindiquinone 218.0561 219.0635 141
P37322 7beta-ethynyl-4a,5,6,7,8,8abeta-Hexahydro-1alpha-hydroxy-1,4ab-dimethyl-2(1H)-naphthalenone 218.1294 219.1361 141

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G238000 hypothetical protein AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein 242
Glyma.01G174600 hypothetical protein AT5G66740:AT5G66740:spindle assembly abnormal protein (DUF620) 240
Glyma.13G203600 hypothetical protein AT5G13490:AAC2:ADP/ATP carrier 2 240
Glyma.20G105100 hypothetical protein NA 239
Glyma.01G174300 hypothetical protein NA 238
Glyma.05G224200 hypothetical protein NA 238
Glyma.06G209300 hypothetical protein NA 238
Glyma.10G080600 hypothetical protein NA 238
Glyma.10G080700 hypothetical protein NA 238
Glyma.10G080900 hypothetical protein NA 238