Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P33461 Lucitanib 443.1838 444.1886 154
P35128 N-Acetylsulfamethazine 320.0994 321.1047 154
P41375 207.1309 208.1388 154
P46482 N-Methoxy-1-vinyl-beta-carboline 224.0945 225.1011 154
P47118 3b,15b,17a-Trihydroxy-pregnenone 348.2285 349.2346 154
P00268 trans-4-Carboxymethylenebut-2-en-4-olide 140.0099 141.0172 153
P00726 Ovalitenin C 322.0797 323.0886 153
P04147 Rubomycin F 599.2034 600.2092 153
P12648 Losmapimod 383.2008 384.2088 153
P23946 Peyophorine 249.1325 250.1414 153

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G238000 hypothetical protein AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein 242
Glyma.01G174600 hypothetical protein AT5G66740:AT5G66740:spindle assembly abnormal protein (DUF620) 240
Glyma.13G203600 hypothetical protein AT5G13490:AAC2:ADP/ATP carrier 2 240
Glyma.20G105100 hypothetical protein NA 239
Glyma.01G174300 hypothetical protein NA 238
Glyma.05G224200 hypothetical protein NA 238
Glyma.06G209300 hypothetical protein NA 238
Glyma.10G080600 hypothetical protein NA 238
Glyma.10G080700 hypothetical protein NA 238
Glyma.10G080900 hypothetical protein NA 238