Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55462 Schidigeragenin B 428.2908 429.2971 —
P55464 131.9595 132.9668 —
P55465 Medicagol 296.0316 297.0374 —
P55468 N-Desmethylzopiclone 374.0907 375.0977 —
P55469 Minwanensin 284.1634 285.1694 —
P55470 YM 47525 618.3033 619.3107 —
P55471 LysW-L-glutamyl 5-phosphate 356.0603 357.0673 —
P55474 Homoneoharringtonine 549.2443 550.2512 —
P55476 175.9825 176.9896 —
P55477 Ajugapantin A 550.2419 551.2490 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G238000 hypothetical protein AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein 242
Glyma.01G174600 hypothetical protein AT5G66740:AT5G66740:spindle assembly abnormal protein (DUF620) 240
Glyma.13G203600 hypothetical protein AT5G13490:AAC2:ADP/ATP carrier 2 240
Glyma.20G105100 hypothetical protein NA 239
Glyma.01G174300 hypothetical protein NA 238
Glyma.05G224200 hypothetical protein NA 238
Glyma.06G209300 hypothetical protein NA 238
Glyma.10G080600 hypothetical protein NA 238
Glyma.10G080700 hypothetical protein NA 238
Glyma.10G080900 hypothetical protein NA 238