Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P00788	Tyrphostin B42	294.0991	295.1079	199
P07827		809.2516	810.2565	199
P14487	Yuzurimine E	429.2528	430.2610	199
P42503		121.9563	122.9631	199
P50354	Nodulisporic acid C2	701.4348	702.4409	199
P54402	Catuabine E	371.1815	372.1888	199
P26744	FR901537	507.1481	508.1541	198
P04642	Aminoacylase	536.2172	537.2249	197
P15145	Geodiamolide M	609.2125	610.2230	197
P33997		615.3757	616.3848	197

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.18G238000	hypothetical protein	AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein	242
Glyma.01G174600	hypothetical protein	AT5G66740:AT5G66740:spindle assembly abnormal protein (DUF620)	240
Glyma.13G203600	hypothetical protein	AT5G13490:AAC2:ADP/ATP carrier 2	240
Glyma.20G105100	hypothetical protein	NA	239
Glyma.01G174300	hypothetical protein	NA	238
Glyma.05G224200	hypothetical protein	NA	238
Glyma.06G209300	hypothetical protein	NA	238
Glyma.10G080600	hypothetical protein	NA	238
Glyma.10G080700	hypothetical protein	NA	238
Glyma.10G080900	hypothetical protein	NA	238