Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P13650 Dibalanocarpol 938.2662 939.2698 111
P14056 2-Oxo-8-methylthiooctanoic acid 204.0819 205.0892 111
P14846 2,3-Dihydro-1H-pyrrolizine-5-carboxaldehyde 135.0667 136.0746 111
P16984 N-D-Glucosylarylamine 255.1088 256.1158 111
P17883 587.8008 588.8095 111
P18890 Rhamnetin 3-rhamnosyl-(1->3)(4'''-acetylrhamnosyl)(1->6)-galactoside 812.2394 813.2447 111
P20995 Renieramycin R 605.2442 606.2541 111
P25679 Citronellate 170.1291 171.1358 111
P27806 Fenoverine 459.1623 460.1680 111
P28252 Hypochoeroside K 398.2271 399.2333 111

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G238000 hypothetical protein AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein 242
Glyma.01G174600 hypothetical protein AT5G66740:AT5G66740:spindle assembly abnormal protein (DUF620) 240
Glyma.13G203600 hypothetical protein AT5G13490:AAC2:ADP/ATP carrier 2 240
Glyma.20G105100 hypothetical protein NA 239
Glyma.01G174300 hypothetical protein NA 238
Glyma.05G224200 hypothetical protein NA 238
Glyma.06G209300 hypothetical protein NA 238
Glyma.10G080600 hypothetical protein NA 238
Glyma.10G080700 hypothetical protein NA 238
Glyma.10G080900 hypothetical protein NA 238