Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

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Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P29783	Triptregeline I	589.2398	590.2460	138
P30687		623.7960	624.8037	138
P33333		873.1893	874.1999	138
P39647	1,10-Epoxy-aristolane	220.1808	441.3688	138
P41900	Sinuolatin A	396.2153	397.2208	138
P41927	6beta-(2'-Methylbutanoyloxy)-10beta-hydroxy-8alpha-methoxyeremophil-7(11)-en-12,8beta-olide	380.2187	381.2246	138
P43144		545.2495	546.2561	138
P48892	(3E,5Z)-1,3,5-Heptatriene	94.0774	95.0849	138
P51053		519.1231	520.1312	138
P00197		173.0305	174.0385	137

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G177400	hypothetical protein	NA
Glyma.20G177700	hypothetical protein	AT3G52300:ATPQ:ATP synthase D chain
Glyma.20G177900	hypothetical protein	NA
Glyma.20G178000	hypothetical protein	NA
Glyma.20G178100	hypothetical protein	AT5G50840:AT5G50840:alpha-taxilin-like protein
Glyma.20G178200	hypothetical protein	AT5G52980:AT5G52980:ER-based factor for assembly of V-ATPase
Glyma.20G178300	hypothetical protein	AT4G25030:AT4G25030:Serine/Threonine-kinase
Glyma.20G178500	hypothetical protein	AT3G52250:AT3G52250:Duplicated homeodomain-like superfamily protein
Glyma.20G178600	hypothetical protein	AT3G07990:SCPL27:serine carboxypeptidase-like 27
Glyma.20G178700	hypothetical protein	AT3G12090:TET6:tetraspanin6