Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

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Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P45405	Tabun	162.0554	163.0611	139
P01361	Arctinol	264.0284	265.0373	138
P04584	2-Methylacetoacetic acid	116.0478	117.0546	138
P06382	eribaxaban	484.1280	485.1368	138
P10526	3,4,5-Trimethoxyphenyl acetate	226.0836	227.0894	138
P15136		799.3134	800.3211	138
P21419	Hemiphroside A	668.2311	669.2398	138
P26172	6'-Oxolividamine	305.1605	306.1677	138
P26977	Benzyl chloroacetate	184.0295	185.0374	138
P27453	6alpha,9alpha-Difluoroprednisolone-17-butyrate	466.2166	467.2245	138

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G177400	hypothetical protein	NA
Glyma.20G177700	hypothetical protein	AT3G52300:ATPQ:ATP synthase D chain
Glyma.20G177900	hypothetical protein	NA
Glyma.20G178000	hypothetical protein	NA
Glyma.20G178100	hypothetical protein	AT5G50840:AT5G50840:alpha-taxilin-like protein
Glyma.20G178200	hypothetical protein	AT5G52980:AT5G52980:ER-based factor for assembly of V-ATPase
Glyma.20G178300	hypothetical protein	AT4G25030:AT4G25030:Serine/Threonine-kinase
Glyma.20G178500	hypothetical protein	AT3G52250:AT3G52250:Duplicated homeodomain-like superfamily protein
Glyma.20G178600	hypothetical protein	AT3G07990:SCPL27:serine carboxypeptidase-like 27
Glyma.20G178700	hypothetical protein	AT3G12090:TET6:tetraspanin6