Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P37074 Ankalactone 338.1703 339.1787 145
P44378 Malyngamide P 457.2574 458.2627 145
P44487 PIP(20:0/18:1(12Z)-2OH(9,10)) 1004.5455 1005.5421 145
P45739 Pubescenine 495.2845 496.2922 145
P46931 670.2582 671.2691 145
P54280 Brachycerine 546.2208 547.2298 145
P00923 Parguerol 456.1477 457.1530 144
P03962 18-hydroxyjaconine 403.1426 404.1512 144
P06903 259.0544 260.0620 144
P09821 L-Leucine-p-nitroanilide 251.1247 252.1302 144

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G177400 hypothetical protein NA 0
Glyma.20G177700 hypothetical protein AT3G52300:ATPQ:ATP synthase D chain 0
Glyma.20G177900 hypothetical protein NA 0
Glyma.20G178000 hypothetical protein NA 0
Glyma.20G178100 hypothetical protein AT5G50840:AT5G50840:alpha-taxilin-like protein 0
Glyma.20G178200 hypothetical protein AT5G52980:AT5G52980:ER-based factor for assembly of V-ATPase 0
Glyma.20G178300 hypothetical protein AT4G25030:AT4G25030:Serine/Threonine-kinase 0
Glyma.20G178500 hypothetical protein AT3G52250:AT3G52250:Duplicated homeodomain-like superfamily protein 0
Glyma.20G178600 hypothetical protein AT3G07990:SCPL27:serine carboxypeptidase-like 27 0
Glyma.20G178700 hypothetical protein AT3G12090:TET6:tetraspanin6 0