Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55273 Cistanoside D 652.2406 653.2558 —
P55274 Clobenzorex 259.1142 260.1207 —
P55275 609.7594 610.7622 —
P55277 Tiegusanin I 570.2441 571.2512 —
P55281 607.8298 608.8337 —
P55282 Difluprednate 508.2267 509.2321 —
P55283 Aerobactin 564.2307 565.2395 —
P55284 Boletocrocin B 499.2284 500.2320 —
P55285 Nicotaxine 555.2530 556.2628 —
P55289 608.8615 609.8654 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G177400 hypothetical protein NA 0
Glyma.20G177700 hypothetical protein AT3G52300:ATPQ:ATP synthase D chain 0
Glyma.20G177900 hypothetical protein NA 0
Glyma.20G178000 hypothetical protein NA 0
Glyma.20G178100 hypothetical protein AT5G50840:AT5G50840:alpha-taxilin-like protein 0
Glyma.20G178200 hypothetical protein AT5G52980:AT5G52980:ER-based factor for assembly of V-ATPase 0
Glyma.20G178300 hypothetical protein AT4G25030:AT4G25030:Serine/Threonine-kinase 0
Glyma.20G178500 hypothetical protein AT3G52250:AT3G52250:Duplicated homeodomain-like superfamily protein 0
Glyma.20G178600 hypothetical protein AT3G07990:SCPL27:serine carboxypeptidase-like 27 0
Glyma.20G178700 hypothetical protein AT3G12090:TET6:tetraspanin6 0