Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P00823	(-)-Mintlactone	306.0213	307.0281	164
P07492	Polypropylene glycol (m w 1,200-3,000)	134.0949	135.1012	164
P10281	Undeca-2,4,6-trienedioyl-CoA	959.2076	960.2157	164
P15662		513.2875	514.2951	164
P18935	Marchantin P	438.1840	439.1899	164
P22654	Excavatolide D	524.2197	525.2274	164
P32650	Thonzylamine	286.1756	287.1822	164
P34351	Arginylglutamine	302.1710	605.3489	164
P48467	13-Apo-beta-carotenone	258.1964	259.2031	164
P01110	(R)-11,12,13-Trinor-1(5),6,9-guaiatrien-8-one	174.1043	175.1111	163

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G177400	hypothetical protein	NA
Glyma.20G177700	hypothetical protein	AT3G52300:ATPQ:ATP synthase D chain
Glyma.20G177900	hypothetical protein	NA
Glyma.20G178000	hypothetical protein	NA
Glyma.20G178100	hypothetical protein	AT5G50840:AT5G50840:alpha-taxilin-like protein
Glyma.20G178200	hypothetical protein	AT5G52980:AT5G52980:ER-based factor for assembly of V-ATPase
Glyma.20G178300	hypothetical protein	AT4G25030:AT4G25030:Serine/Threonine-kinase
Glyma.20G178500	hypothetical protein	AT3G52250:AT3G52250:Duplicated homeodomain-like superfamily protein
Glyma.20G178600	hypothetical protein	AT3G07990:SCPL27:serine carboxypeptidase-like 27
Glyma.20G178700	hypothetical protein	AT3G12090:TET6:tetraspanin6