Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

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Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P12304	Amrubicin	483.1476	484.1512	176
P17789	Kaempferol 3-neohesperidoside-7-(6''-malonylglucoside)	872.2263	873.2325	176
P20561		669.1601	670.1662	176
P29540	Kadsuphilol L	606.2044	607.2073	176
P29563	Sulfocostunolide A	312.1036	313.1116	176
P29935	Acantrifoside A	942.5143	943.5248	176
P36283	Isopropyl dodecylfluorophosphonate	294.2113	295.2185	176
P38088		365.6483	366.6561	176
P00499	1-Pentanesulfonic acid	152.0504	153.0569	175
P32791	Tenuecyclamide A	460.0996	461.1056	175

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

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Gene ID	Description	Arabidopsis ortholog
Glyma.20G177400	hypothetical protein	NA
Glyma.20G177700	hypothetical protein	AT3G52300:ATPQ:ATP synthase D chain
Glyma.20G177900	hypothetical protein	NA
Glyma.20G178000	hypothetical protein	NA
Glyma.20G178100	hypothetical protein	AT5G50840:AT5G50840:alpha-taxilin-like protein
Glyma.20G178200	hypothetical protein	AT5G52980:AT5G52980:ER-based factor for assembly of V-ATPase
Glyma.20G178300	hypothetical protein	AT4G25030:AT4G25030:Serine/Threonine-kinase
Glyma.20G178500	hypothetical protein	AT3G52250:AT3G52250:Duplicated homeodomain-like superfamily protein
Glyma.20G178600	hypothetical protein	AT3G07990:SCPL27:serine carboxypeptidase-like 27
Glyma.20G178700	hypothetical protein	AT3G12090:TET6:tetraspanin6