Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

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Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P14703	Dillapional	236.0658	237.0736	195
P30058	Koraiol	222.1951	223.2018	195
P12116	o-Methylacetophenone	134.0716	135.0790	194
P16820	Petunidin 3-(6''-malonylglucoside)	564.1095	565.1176	194
P28303	Nannochelin B	754.3070	755.3117	194
P37556		807.4435	808.4480	194
P41491		677.8221	678.8305	194
P01926	Hyacinthacine A4	187.1208	188.1264	193
P06218	Repaglinide	452.2673	453.2779	193
P08723	(2R,3R,5R)-2-(S-Pantetheinyl)-carbapenam-3-carboxylate	431.1720	432.1820	193

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G177400	hypothetical protein	NA
Glyma.20G177700	hypothetical protein	AT3G52300:ATPQ:ATP synthase D chain
Glyma.20G177900	hypothetical protein	NA
Glyma.20G178000	hypothetical protein	NA
Glyma.20G178100	hypothetical protein	AT5G50840:AT5G50840:alpha-taxilin-like protein
Glyma.20G178200	hypothetical protein	AT5G52980:AT5G52980:ER-based factor for assembly of V-ATPase
Glyma.20G178300	hypothetical protein	AT4G25030:AT4G25030:Serine/Threonine-kinase
Glyma.20G178500	hypothetical protein	AT3G52250:AT3G52250:Duplicated homeodomain-like superfamily protein
Glyma.20G178600	hypothetical protein	AT3G07990:SCPL27:serine carboxypeptidase-like 27
Glyma.20G178700	hypothetical protein	AT3G12090:TET6:tetraspanin6