Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P41898 546.7256 547.7355 141
P45366 Dechlorobarbamide 426.0934 427.1001 141
P48034 Halaminol B 199.1920 200.1999 141
P48323 1-Oleoylglycerophosphocholine 521.3420 522.3497 141
P54222 671.1509 672.1589 141
P05856 Midodrine 254.1227 255.1311 140
P07220 Polyanethole-sulfate 228.0448 229.0527 140
P07629 741.0583 742.0664 140
P10273 5-Imino-2-methyl-1-cyclopenten-1-ol 111.0682 112.0755 140
P20165 (+)-Cheimonophyllal 282.1437 283.1503 140

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G176400 hypothetical protein AT1G22700:AT1G22700:Tetratricopeptide repeat (TPR)-like superfamily protein 0
Glyma.20G176500 hypothetical protein AT1G34370:STOP1:C2H2 and C2HC zinc fingers superfamily protein 0
Glyma.20G176600 hypothetical protein NA 0
Glyma.20G176700 hypothetical protein NA 0
Glyma.20G176800 PT2 NA 0
Glyma.20G176900 hypothetical protein NA 0
Glyma.20G177000 hypothetical protein AT1G34340:AT1G34340:alpha/beta-Hydrolases superfamily protein 0
Glyma.20G177100 hypothetical protein NA 0
Glyma.20G177200 hypothetical protein AT1G35580:CINV1:cytosolic invertase 1__AT4G09510:CINV2:cytosolic invertase 2 0
Glyma.20G177300 hypothetical protein NA 0