Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54631 525.8686 526.8765 —
P54635 1-Dehydroxybaccatin VI 698.2927 699.2980 —
P54637 531.1374 532.1443 —
P54638 531.3851 532.3948 —
P54639 199.9654 200.9730 —
P54643 741.1957 742.1988 —
P54644 622.0622 623.0702 —
P54645 159.9627 160.9703 —
P54647 19-Hydroxyconopharyngine 430.2089 431.2166 —
P54648 5,7-octadienoic acid 140.0828 421.2556 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G175400 hypothetical protein AT4G09580:AT4G09580:SNARE associated Golgi protein family__AT1G71940:AT1G71940:SNARE associated Golgi protein family 0
Glyma.20G175500 hypothetical protein AT1G71930:VND7:vascular related NAC-domain protein 7 0
Glyma.20G175600 hypothetical protein NA 0
Glyma.20G175700 hypothetical protein AT1G65280:AT1G65280:DNAJ heat shock N-terminal domain-containing protein 0
Glyma.20G175800 hypothetical protein NA 0
Glyma.20G175900 hypothetical protein AT4G09620:AT4G09620:Mitochondrial transcription termination factor family protein 0
Glyma.20G176000 hypothetical protein AT1G34550:EMB2756:transmembrane protein (DUF616)__AT4G09630:AT4G09630:transmembrane protein (DUF616) 0
Glyma.20G176100 hypothetical protein NA 0
Glyma.20G176200 hypothetical protein NA 0
Glyma.20G176300 hypothetical protein NA 0