Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P20244 (+)-Trehazolin 366.1291 367.1369 140
P22618 (Z)-3-Hexenyl 3-methylbutanoate 184.1453 185.1523 140
P26724 Arginylthreonine 275.1606 276.1676 140
P28637 630.7857 631.7925 140
P32826 Aszonalenin 373.1797 374.1870 140
P33750 6,8-Epoxy-p-menthane 154.1356 155.1413 140
P34054 Scandenolide 334.1041 335.1106 140
P35584 Maetenoside B 1202.5971 1203.6044 140
P44811 Fargoside D 778.4074 779.4157 140
P46204 SB 311009 408.2576 409.2666 140

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G174300 hypothetical protein NA 0
Glyma.20G174400 hypothetical protein AT1G22660:AT1G22660:Polynucleotide adenylyltransferase family protein 0
Glyma.20G174500 hypothetical protein AT1G71980:AT1G71980:Protease-associated (PA) RING/U-box zinc finger family protein__AT1G35625:AT1G35625:RING/U-box superfamily protein__AT4G09560:AT4G09560:Protease-associated (PA) RING/U-box zinc finger family protein 0
Glyma.20G174600 hypothetical protein AT1G71970:AT1G71970:uncharacterized protein 0
Glyma.20G174700 hypothetical protein NA 0
Glyma.20G174900 hypothetical protein AT1G76850:SEC5A:exocyst complex component sec5 0
Glyma.20G175000 hypothetical protein AT2G47270:UPB1:transcription factor UPBEAT protein 0
Glyma.20G175100 CDPK-BETA calmodulin-like domain protein kinase isoenzyme beta AT4G09570:CPK4:calcium-dependent protein kinase 4 0
Glyma.20G175200 hypothetical protein NA 0
Glyma.20G175300 hypothetical protein AT1G35680:RPL21C:Ribosomal protein L21 0