Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55566 Boceprevir 519.3459 520.3522 —
P55567 114.9560 115.9638 —
P55568 134.9625 135.9704 —
P55569 Cyromazine 166.0977 167.1054 —
P55570 232.8916 233.8992 —
P55573 609.1749 610.1805 —
P55575 Tebufelone 300.2051 601.4175 —
P55578 333.8152 334.8227 —
P55579 259.8976 260.9052 —
P55580 253.9070 254.9140 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G174300 hypothetical protein NA 0
Glyma.20G174400 hypothetical protein AT1G22660:AT1G22660:Polynucleotide adenylyltransferase family protein 0
Glyma.20G174500 hypothetical protein AT1G71980:AT1G71980:Protease-associated (PA) RING/U-box zinc finger family protein__AT1G35625:AT1G35625:RING/U-box superfamily protein__AT4G09560:AT4G09560:Protease-associated (PA) RING/U-box zinc finger family protein 0
Glyma.20G174600 hypothetical protein AT1G71970:AT1G71970:uncharacterized protein 0
Glyma.20G174700 hypothetical protein NA 0
Glyma.20G174900 hypothetical protein AT1G76850:SEC5A:exocyst complex component sec5 0
Glyma.20G175000 hypothetical protein AT2G47270:UPB1:transcription factor UPBEAT protein 0
Glyma.20G175100 CDPK-BETA calmodulin-like domain protein kinase isoenzyme beta AT4G09570:CPK4:calcium-dependent protein kinase 4 0
Glyma.20G175200 hypothetical protein NA 0
Glyma.20G175300 hypothetical protein AT1G35680:RPL21C:Ribosomal protein L21 0