Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P43253 trans-3-Feruloylcorosolic acid 648.3975 649.4013 167
P45751 N-Acetyl-6-O-L-fucosyl-D-glucosamine 367.1494 368.1559 167
P50045 238.1769 239.1867 167
P50584 Caudoxirene 162.1039 163.1101 167
P04849 Gentisic acid 154.0271 155.0333 166
P11735 Okaramine M 482.2333 483.2390 166
P17290 4,4-Difluoro-17beta-hydroxyandrost-5-en-3-one propionate 380.2170 381.2234 166
P21583 771.2251 772.2359 166
P23922 N-[(2Z)-2-Methoxyiminopropyl]-7H-purin-6-amine 220.1076 221.1144 166
P29865 1069.5175 1070.5247 166

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G174300 hypothetical protein NA 0
Glyma.20G174400 hypothetical protein AT1G22660:AT1G22660:Polynucleotide adenylyltransferase family protein 0
Glyma.20G174500 hypothetical protein AT1G71980:AT1G71980:Protease-associated (PA) RING/U-box zinc finger family protein__AT1G35625:AT1G35625:RING/U-box superfamily protein__AT4G09560:AT4G09560:Protease-associated (PA) RING/U-box zinc finger family protein 0
Glyma.20G174600 hypothetical protein AT1G71970:AT1G71970:uncharacterized protein 0
Glyma.20G174700 hypothetical protein NA 0
Glyma.20G174900 hypothetical protein AT1G76850:SEC5A:exocyst complex component sec5 0
Glyma.20G175000 hypothetical protein AT2G47270:UPB1:transcription factor UPBEAT protein 0
Glyma.20G175100 CDPK-BETA calmodulin-like domain protein kinase isoenzyme beta AT4G09570:CPK4:calcium-dependent protein kinase 4 0
Glyma.20G175200 hypothetical protein NA 0
Glyma.20G175300 hypothetical protein AT1G35680:RPL21C:Ribosomal protein L21 0