Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P02131 Eustifoline D 221.0836 222.0913 182
P24545 5-Methoxy-3,4-methylenedioxyamphetamine 209.1042 210.1126 182
P37572 28-Glucosyloleanolic acid 3-[rhamnosyl-(1->2)-galactosyl-(1->3)-glucuronide] 1116.5415 1117.5463 182
P43306 102.0458 103.0535 182
P05454 Leonuriside A 332.1106 333.1163 181
P06475 (+)-5,17-Dehydromatrine N-oxide 262.1661 263.1722 181
P16872 Methyl-4-O-caffeoylquinate 368.1086 369.1180 181
P21471 Illifunone C 252.1331 253.1413 181
P33036 1,5-Dihydro-7-(1-piperidinyl)-imidazo(2,1-b)quinazolin-2(3H)-one 270.1495 271.1555 181
P52796 Famprofazone 377.2443 378.2528 181

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G174300 hypothetical protein NA 0
Glyma.20G174400 hypothetical protein AT1G22660:AT1G22660:Polynucleotide adenylyltransferase family protein 0
Glyma.20G174500 hypothetical protein AT1G71980:AT1G71980:Protease-associated (PA) RING/U-box zinc finger family protein__AT1G35625:AT1G35625:RING/U-box superfamily protein__AT4G09560:AT4G09560:Protease-associated (PA) RING/U-box zinc finger family protein 0
Glyma.20G174600 hypothetical protein AT1G71970:AT1G71970:uncharacterized protein 0
Glyma.20G174700 hypothetical protein NA 0
Glyma.20G174900 hypothetical protein AT1G76850:SEC5A:exocyst complex component sec5 0
Glyma.20G175000 hypothetical protein AT2G47270:UPB1:transcription factor UPBEAT protein 0
Glyma.20G175100 CDPK-BETA calmodulin-like domain protein kinase isoenzyme beta AT4G09570:CPK4:calcium-dependent protein kinase 4 0
Glyma.20G175200 hypothetical protein NA 0
Glyma.20G175300 hypothetical protein AT1G35680:RPL21C:Ribosomal protein L21 0