Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P43008 CDP-DG(20:1(11Z)/20:4(5Z,8Z,11Z,14Z)-OH(18R)) 1071.5472 1072.5499 126
P44177 Thienorphine 521.2527 522.2604 126
P44702 679.3499 680.3566 126
P47846 Primidolol 333.1707 334.1772 126
P48941 Chlorphentermine 183.0837 184.0912 126
P53450 Estradiol 17-O-Octadecanoate 538.4361 539.4414 126
P55432 Albanol B 558.1317 559.1392 126
P00757 NAC-Diketide 307.0886 308.0954 125
P00829 1-Bromo-8-ketoambliol A 438.1405 439.1488 125
P02153 366.0323 367.0412 125

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G174300 hypothetical protein NA 0
Glyma.20G174400 hypothetical protein AT1G22660:AT1G22660:Polynucleotide adenylyltransferase family protein 0
Glyma.20G174500 hypothetical protein AT1G71980:AT1G71980:Protease-associated (PA) RING/U-box zinc finger family protein__AT1G35625:AT1G35625:RING/U-box superfamily protein__AT4G09560:AT4G09560:Protease-associated (PA) RING/U-box zinc finger family protein 0
Glyma.20G174600 hypothetical protein AT1G71970:AT1G71970:uncharacterized protein 0
Glyma.20G174700 hypothetical protein NA 0
Glyma.20G174900 hypothetical protein AT1G76850:SEC5A:exocyst complex component sec5 0
Glyma.20G175000 hypothetical protein AT2G47270:UPB1:transcription factor UPBEAT protein 0
Glyma.20G175100 CDPK-BETA calmodulin-like domain protein kinase isoenzyme beta AT4G09570:CPK4:calcium-dependent protein kinase 4 0
Glyma.20G175200 hypothetical protein NA 0
Glyma.20G175300 hypothetical protein AT1G35680:RPL21C:Ribosomal protein L21 0