Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P18070 Cymbidine A 949.4154 950.4239 236
P25621 Pseudoanisatin 298.1384 299.1467 236
P47300 534.7868 535.7927 236
P31222 Sufotidine 421.2096 422.2177 235
P03976 Dilmapimod 456.1404 457.1517 234
P53033 7-Oxononane-1,1,9-tricarbaldehyde 226.1222 227.1285 234
P05631 Trimethyl orthoacetate 120.0775 121.0848 233
P13790 317.1926 318.1997 233
P23295 3beta-(4-Iodophenyl)tropan-2beta-carboxylic acid isopropyl ester 413.0800 414.0838 233
P11101 L-beta-aspartyl-L-phenylalanine 280.1044 281.1122 231

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G173100 hypothetical protein AT1G71840:AT1G71840:transducin family protein / WD-40 repeat family protein 0
Glyma.20G173300 hypothetical protein AT1G22270:AT1G22270:Trm112p-like protein__AT1G78190:AT1G78190:Trm112p-like protein 0
Glyma.20G173500 hypothetical protein NA 0
Glyma.20G173600 hypothetical protein AT1G34300:AT1G34300:lectin protein kinase family protein 0
Glyma.20G173700 hypothetical protein AT1G71860:PTP1:protein tyrosine phosphatase 1 0
Glyma.20G173800 hypothetical protein NA 0
Glyma.20G173900 hypothetical protein NA 0
Glyma.20G174000 hypothetical protein AT1G34320:AT1G34320:Ikzf5 (DUF668) 0
Glyma.20G174100 hypothetical protein NA 0
Glyma.20G174200 hypothetical protein NA 0