Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09175 N-((6-Methyl-5-oxo-3-thiomorpholinyl)carbonyl)-L-histidyl-L-proline 409.1415 410.1489 174
P13516 17-AAG 585.3021 586.3065 174
P32078 PA(20:4(6Z,8E,10E,14Z)-2OH(5S,12R)/18:4(6Z,9Z,12Z,15Z)) 748.4353 749.4432 174
P36912 Rhodojaponin IV 454.2533 455.2601 174
P39839 223.1261 224.1336 174
P40128 O-Demethylpuromycin 457.2031 458.2087 174
P42303 Swietenitin C 814.3052 815.3111 174
P43471 Huperzine T 277.1674 278.1738 174
P44943 Asparagoside C 740.4321 741.4375 174
P50462 Fungicide K 99-5278B 564.3682 565.3728 174

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G171300 hypothetical protein AT1G22750:AT1G22750:uncharacterized protein 0
Glyma.20G171500 hypothetical protein NA 0
Glyma.20G171600 hypothetical protein NA 0
Glyma.20G171900 hypothetical protein AT1G14550:AT1G14550:Peroxidase superfamily protein 0
Glyma.20G172000 hypothetical protein NA 0
Glyma.20G172300 hypothetical protein AT5G36120:CCB3:cofactor assembly, complex C (B6F) 0
Glyma.20G172400 hypothetical protein AT4G09670:AT4G09670:Oxidoreductase family protein__AT1G34200:AT1G34200:Glyceraldehyde-3-phosphate dehydrogenase-like family protein 0
Glyma.20G172500 hypothetical protein AT5G09970:CYP78A7:cytochrome P450, family 78, subfamily A, polypeptide 7 0
Glyma.20G172600 hypothetical protein AT5G48100:TT10:Laccase/Diphenol oxidase family protein 0
Glyma.20G172800 hypothetical protein NA 0