Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P30741 3-(Allyloxy)estra-1,3,5(10)-triene-16beta,17beta-diol 328.2035 329.2092 187
P31583 Rhusemialin A 582.2091 583.2134 187
P46610 Sarpogrelate 429.2126 430.2176 187
P03242 S-Adenosyl-L-homocysteine 384.1215 385.1299 186
P09306 6Z-octenoic acid 142.0971 143.1040 186
P19172 5-Hydroxydec-8-enedioylcarnitine 359.2012 360.2078 186
P35787 PG(a-25:0/PGD2) 944.6181 945.6254 186
P51071 Luteolin 7-(2''-glucosyllactate) 520.1177 521.1264 186
P53404 2-Chloro-4-[(dimethylcarbamoyl)amino]benzoic acid 242.0430 243.0520 186
P11526 (-)-2,3-Dihydrocitromycetin 292.0562 293.0641 185

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G171300 hypothetical protein AT1G22750:AT1G22750:uncharacterized protein 0
Glyma.20G171500 hypothetical protein NA 0
Glyma.20G171600 hypothetical protein NA 0
Glyma.20G171900 hypothetical protein AT1G14550:AT1G14550:Peroxidase superfamily protein 0
Glyma.20G172000 hypothetical protein NA 0
Glyma.20G172300 hypothetical protein AT5G36120:CCB3:cofactor assembly, complex C (B6F) 0
Glyma.20G172400 hypothetical protein AT4G09670:AT4G09670:Oxidoreductase family protein__AT1G34200:AT1G34200:Glyceraldehyde-3-phosphate dehydrogenase-like family protein 0
Glyma.20G172500 hypothetical protein AT5G09970:CYP78A7:cytochrome P450, family 78, subfamily A, polypeptide 7 0
Glyma.20G172600 hypothetical protein AT5G48100:TT10:Laccase/Diphenol oxidase family protein 0
Glyma.20G172800 hypothetical protein NA 0