Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P29744 Miraziridine A 668.3944 669.3997 128
P32247 6-Amino-9-benzyl-2-(2-methoxyethoxy)-9H-purin-8-ol 315.1328 316.1393 128
P36550 PGP(18:1(9Z)/6 keto-PGF1alpha) 942.4871 943.4926 128
P39433 3'-Hydroxy T-2 toxin 482.2170 483.2228 128
P41604 561.7429 562.7470 128
P46992 2-Amino-4-hydroxy-6,7-dimethyl-5,6,7,8-tetrahydropteridine 195.1118 196.1184 128
P02554 Hygrocin B 507.1927 508.1967 127
P04997 Imazapyr 261.1122 262.1191 127
P06840 13-Hydroxypalmatine 367.1410 368.1487 127
P07347 Coumanolignan 318.1268 319.1321 127

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G171300 hypothetical protein AT1G22750:AT1G22750:uncharacterized protein 0
Glyma.20G171500 hypothetical protein NA 0
Glyma.20G171600 hypothetical protein NA 0
Glyma.20G171900 hypothetical protein AT1G14550:AT1G14550:Peroxidase superfamily protein 0
Glyma.20G172000 hypothetical protein NA 0
Glyma.20G172300 hypothetical protein AT5G36120:CCB3:cofactor assembly, complex C (B6F) 0
Glyma.20G172400 hypothetical protein AT4G09670:AT4G09670:Oxidoreductase family protein__AT1G34200:AT1G34200:Glyceraldehyde-3-phosphate dehydrogenase-like family protein 0
Glyma.20G172500 hypothetical protein AT5G09970:CYP78A7:cytochrome P450, family 78, subfamily A, polypeptide 7 0
Glyma.20G172600 hypothetical protein AT5G48100:TT10:Laccase/Diphenol oxidase family protein 0
Glyma.20G172800 hypothetical protein NA 0