Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P01785 428.0342 429.0403 137
P03606 N-(gamma-Glutamyl)ethanolamine 190.0927 191.1000 137
P09770 (E)-Methyl-4-hydroxycinnamate 178.0624 179.0690 137
P12839 2S-(6,12-dichloro-dodecanoyloxy)-propanoic acid 340.1245 341.1322 137
P16672 (+)-(R)-(E)-3'-Hydroxyartemidin 216.0801 217.0867 137
P17329 3,5,5-Trimethyl-1,2-cyclohexanedione 154.0982 155.1055 137
P23820 Teucrolin D 438.1882 439.1937 137
P24445 Isobetanidin-6-O-beta-sophoroside 712.2079 713.2204 137
P24826 Actinoplanone G 618.1737 619.1789 137
P32466 Anadur 506.3394 507.3483 137

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G170000 hypothetical protein AT1G22770:GI:gigantea protein (GI) 0
Glyma.20G170100 hypothetical protein NA 0
Glyma.20G170200 hypothetical protein AT1G71696:SOL1:carboxypeptidase D 0
Glyma.20G170600 hypothetical protein AT1G71720:PDE338:Nucleic acid-binding proteins superfamily 0
Glyma.20G170700 hypothetical protein AT2G30060:AT2G30060:Pleckstrin homology (PH) domain superfamily protein__AT1G07140:SIRANBP:Pleckstrin homology (PH) domain superfamily protein__AT5G58590:RANBP1:RAN binding protein 1 0
Glyma.20G170800 hypothetical protein NA 0
Glyma.20G170900 hypothetical protein AT1G34110:AT1G34110:Leucine-rich receptor-like protein kinase family protein 0
Glyma.20G171000 hypothetical protein AT1G71730:AT1G71730:uncharacterized protein 0
Glyma.20G171100 hypothetical protein AT1G71750:HGPT:Hypoxanthine-guanine phosphoribosyltransferase 0
Glyma.20G171200 hypothetical protein AT1G71770:PAB5:poly(A)-binding protein 5 0