Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55367 157.9660 158.9738 —
P55373 625.1241 626.1300 —
P55374 Pyridomacrolidin 581.2199 582.2304 —
P55377 607.8877 608.8918 —
P55379 Pre-alcaligin 422.2002 423.2039 —
P55381 Hydroxynybomycin 314.0896 315.0962 —
P55383 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1080 503.1150 —
P55387 257.9007 258.9083 —
P55389 (4R)-4-Hydroxyipecoside 581.2079 582.2145 —
P55390 Withaperuvin H 578.2554 579.2585 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G170000 hypothetical protein AT1G22770:GI:gigantea protein (GI) 0
Glyma.20G170100 hypothetical protein NA 0
Glyma.20G170200 hypothetical protein AT1G71696:SOL1:carboxypeptidase D 0
Glyma.20G170600 hypothetical protein AT1G71720:PDE338:Nucleic acid-binding proteins superfamily 0
Glyma.20G170700 hypothetical protein AT2G30060:AT2G30060:Pleckstrin homology (PH) domain superfamily protein__AT1G07140:SIRANBP:Pleckstrin homology (PH) domain superfamily protein__AT5G58590:RANBP1:RAN binding protein 1 0
Glyma.20G170800 hypothetical protein NA 0
Glyma.20G170900 hypothetical protein AT1G34110:AT1G34110:Leucine-rich receptor-like protein kinase family protein 0
Glyma.20G171000 hypothetical protein AT1G71730:AT1G71730:uncharacterized protein 0
Glyma.20G171100 hypothetical protein AT1G71750:HGPT:Hypoxanthine-guanine phosphoribosyltransferase 0
Glyma.20G171200 hypothetical protein AT1G71770:PAB5:poly(A)-binding protein 5 0