Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P07122 p-Coumaroyl-malic acid 280.0568 281.0648 170
P15887 Tiagabine 375.1341 376.1391 170
P22733 9R-hydroxy-2S,8S-dimethyl-3-oxo-2E,4E-undecadienoic acid 240.1333 241.1401 170
P32315 839.3560 840.3653 170
P35427 690.1372 691.1470 170
P44438 Benzenepropanoic acid, 4-hydroxy-alpha-(2-((3-(hydroxyamino)-3-oxo-1-(phenylmethyl)propyl)amino)-2-oxoethyl)-3-iodo- 526.0601 527.0660 170
P49144 d-Phenylalanyl-l-prolyl-l-arginyl-chloromethyl ketone 926.4041 927.4114 170
P08848 594.1727 595.1810 169
P09434 2-(3,4-Dihydro-2,2-dimethyl-6-nitro-2H-1,4-benzoxazin-4-yl)pyridine N-oxide 301.1057 302.1136 169
P09532 Guangsangon M 610.1807 611.1855 169

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G170000 hypothetical protein AT1G22770:GI:gigantea protein (GI) 0
Glyma.20G170100 hypothetical protein NA 0
Glyma.20G170200 hypothetical protein AT1G71696:SOL1:carboxypeptidase D 0
Glyma.20G170600 hypothetical protein AT1G71720:PDE338:Nucleic acid-binding proteins superfamily 0
Glyma.20G170700 hypothetical protein AT2G30060:AT2G30060:Pleckstrin homology (PH) domain superfamily protein__AT1G07140:SIRANBP:Pleckstrin homology (PH) domain superfamily protein__AT5G58590:RANBP1:RAN binding protein 1 0
Glyma.20G170800 hypothetical protein NA 0
Glyma.20G170900 hypothetical protein AT1G34110:AT1G34110:Leucine-rich receptor-like protein kinase family protein 0
Glyma.20G171000 hypothetical protein AT1G71730:AT1G71730:uncharacterized protein 0
Glyma.20G171100 hypothetical protein AT1G71750:HGPT:Hypoxanthine-guanine phosphoribosyltransferase 0
Glyma.20G171200 hypothetical protein AT1G71770:PAB5:poly(A)-binding protein 5 0