Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P23907 968.2928 969.3031 132
P26825 850.3598 851.3632 132
P30950 14-Hydroxycathovaline 442.2134 443.2199 132
P33509 2-Hydroxy-6-oxo-6-(2-hydroxyphenoxy)-hexa-2,4-dienoate 250.0469 251.0549 132
P34626 Microtoenin C 941.5073 942.5094 132
P55525 271.1993 272.2052 132
P04118 9-Methoxy-7-phenyl-5H-furo[3,2-g][1]benzopyran-5-one 292.0726 293.0816 131
P06579 4-O-Methylascochlorin 418.1920 419.1981 131
P07063 Suffruticoside E 622.2095 623.2178 131
P08863 428.0566 429.0641 131

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G170000 hypothetical protein AT1G22770:GI:gigantea protein (GI) 0
Glyma.20G170100 hypothetical protein NA 0
Glyma.20G170200 hypothetical protein AT1G71696:SOL1:carboxypeptidase D 0
Glyma.20G170600 hypothetical protein AT1G71720:PDE338:Nucleic acid-binding proteins superfamily 0
Glyma.20G170700 hypothetical protein AT2G30060:AT2G30060:Pleckstrin homology (PH) domain superfamily protein__AT1G07140:SIRANBP:Pleckstrin homology (PH) domain superfamily protein__AT5G58590:RANBP1:RAN binding protein 1 0
Glyma.20G170800 hypothetical protein NA 0
Glyma.20G170900 hypothetical protein AT1G34110:AT1G34110:Leucine-rich receptor-like protein kinase family protein 0
Glyma.20G171000 hypothetical protein AT1G71730:AT1G71730:uncharacterized protein 0
Glyma.20G171100 hypothetical protein AT1G71750:HGPT:Hypoxanthine-guanine phosphoribosyltransferase 0
Glyma.20G171200 hypothetical protein AT1G71770:PAB5:poly(A)-binding protein 5 0