Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P42119 921.9813 922.9917 173
P44185 (9E)-Dodecenoylcarnitine 341.2519 342.2599 173
P52922 Malachite green 328.1969 329.2060 173
P55415 421.3709 422.3785 173
P10915 757.1991 758.2064 172
P17621 o-Benzoquinone 108.0194 109.0278 172
P18759 760.1825 761.1938 172
P21076 2,5-Dioxopyrrolidin-1-yl 4-(bis(4-chlorophenyl)methyl)piperazine-1-carboxylate 461.0890 462.0939 172
P31391 297.0583 298.0641 172
P36809 (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine 204.1488 205.1568 172

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G168500 hypothetical protein NA 0
Glyma.20G168600 hypothetical protein NA 0
Glyma.20G168700 hypothetical protein NA 0
Glyma.20G168900 hypothetical protein NA 0
Glyma.20G169000 hypothetical protein NA 0
Glyma.20G169100 hypothetical protein NA 0
Glyma.20G169300 hypothetical protein AT4G09890:AT4G09890:mediator of RNA polymerase II transcription subunit, putative (DUF3511) 0
Glyma.20G169400 hypothetical protein NA 0
Glyma.20G169500 hypothetical protein AT1G34000:OHP2:one-helix protein 2 0
Glyma.20G169800 hypothetical protein AT4G09830:AT4G09830:nuclear receptor family 2 group C protein 0