Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55291 (+)-Pyripyropene A 583.2480 584.2538 —
P55292 609.7012 610.7065 —
P55293 352.6007 353.6073 —
P55297 Triptregeline A 669.2503 670.2541 —
P55298 7-O-Methyl-N-deacetylipecoside 535.2337 536.2405 —
P55301 2-((2-Methoxy-2-(3-(trifluoromethyl)phenyl)ethyl)amino)ethyl 4-(2-(2-(9H-fluoren-9-yl)acetamido)ethyl)benzoate 616.2553 617.2592 —
P55303 16-Hydroxymilolide G 626.2577 627.2664 —
P55305 Pyronine Y 266.1428 267.1514 —
P55308 609.0335 610.0387 —
P55320 627.2615 628.2696 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G167300 hypothetical protein AT1G18740:AT1G18740:ROH1, putative (DUF793)__AT1G43630:AT1G43630:plant/protein (DUF793) 0
Glyma.20G167400 hypothetical protein NA 0
Glyma.20G167500 hypothetical protein NA 0
Glyma.20G167600 hypothetical protein AT1G22780:PFL:Ribosomal protein S13/S18 family 0
Glyma.20G167700 hypothetical protein AT1G76760:TY1:thioredoxin Y1__AT1G43560:ty2:thioredoxin Y2 0
Glyma.20G167800 hypothetical protein AT1G43580:AT1G43580:Sphingomyelin synthetase family protein 0
Glyma.20G168000 hypothetical protein NA 0
Glyma.20G168200 hypothetical protein AT1G21090:AT1G21090:Cupredoxin superfamily protein 0
Glyma.20G168300 hypothetical protein AT1G76750:EC1.1:egg cell-secreted-like protein (DUF1278) 0
Glyma.20G168400 hypothetical protein AT1G43190:PTB3:polypyrimidine tract-binding protein 3 0