Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55067 6-Galloylglucose 310.1444 311.1521 —
P55071 Met-leu-phe 409.2063 410.2147 —
P55072 2-(1,3-Dimethyl-2,6-dioxo-1,2,3,6-tetrahydro-7H-purin-7-yl)-N-(4-isopropylphenyl)acetamide 355.1626 356.1697 —
P55078 WF 14865B 367.1860 368.1898 —
P55080 alpha-Carboxyethyl hydroxychroman 222.0903 223.0962 —
P55088 Methylenecyclohexane 96.0927 97.1002 —
P55095 Nicergoline 483.1218 484.1274 —
P55098 3beta-Chloro-5-androsten-17beta-ol 308.1916 309.1988 —
P55107 Rosmarinine-2-acetate 395.1936 396.2015 —
P55125 2,4-Dimethyl-1-(1-methylethyl)-benzene 148.1239 149.1311 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G167300 hypothetical protein AT1G18740:AT1G18740:ROH1, putative (DUF793)__AT1G43630:AT1G43630:plant/protein (DUF793) 0
Glyma.20G167400 hypothetical protein NA 0
Glyma.20G167500 hypothetical protein NA 0
Glyma.20G167600 hypothetical protein AT1G22780:PFL:Ribosomal protein S13/S18 family 0
Glyma.20G167700 hypothetical protein AT1G76760:TY1:thioredoxin Y1__AT1G43560:ty2:thioredoxin Y2 0
Glyma.20G167800 hypothetical protein AT1G43580:AT1G43580:Sphingomyelin synthetase family protein 0
Glyma.20G168000 hypothetical protein NA 0
Glyma.20G168200 hypothetical protein AT1G21090:AT1G21090:Cupredoxin superfamily protein 0
Glyma.20G168300 hypothetical protein AT1G76750:EC1.1:egg cell-secreted-like protein (DUF1278) 0
Glyma.20G168400 hypothetical protein AT1G43190:PTB3:polypyrimidine tract-binding protein 3 0