Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P38174 Azaspiracid 13 859.4835 860.4922 240
P40405 659.3981 660.4063 239
P00636 157.9538 158.9609 238
P12469 2,5-Dimethylfuran 96.0568 97.0643 238
P22595 Mucronulatol-(4->5')-vestitol 572.1981 573.2085 238
P38652 Mollicellin M 416.0708 417.0813 238
P14214 Decarbamoylgonyautoxin 1 368.0761 369.0806 237
P22578 583.1306 584.1392 237
P30643 Tetralin 132.0926 133.1001 237
P13409 706.1236 707.1314 236

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G163100 hypothetical protein AT5G52810:AT5G52810:NAD(P)-binding Rossmann-fold superfamily protein 0
Glyma.20G163200 hypothetical protein AT5G52830:WRKY27:WRKY DNA-binding protein 27 0
Glyma.20G163300 hypothetical protein AT5G52850:AT5G52850:Pentatricopeptide repeat (PPR) superfamily protein 0
Glyma.20G163400 hypothetical protein AT4G11810:AT4G11810:Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein__AT1G63010:AT1G63010:Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein 0
Glyma.20G163500 hypothetical protein AT5G52860:ABCG8:ABC-2 type transporter family protein 0
Glyma.20G163600 hypothetical protein AT5G52870:MAKR5:membrane-associated kinase regulator 0
Glyma.20G163700 hypothetical protein AT4G23630:BTI1:VIRB2-interacting protein 1 0
Glyma.20G163800 hypothetical protein AT5G52880:AT5G52880:F-box family protein 0
Glyma.20G163900 hypothetical protein AT5G52882:AT5G52882:P-loop containing nucleoside triphosphate hydrolases superfamily protein 0
Glyma.20G164000 hypothetical protein AT5G52900:MAKR6:membrane-associated kinase regulator 0