Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P06381 6',7'-Dihydroxybergamottin 372.1547 373.1621 162
P06792 Myo-inositol glutamate 323.0859 324.0925 162
P10166 Demeton-O 258.0513 259.0583 162
P11723 Isomagnolol 266.1356 267.1438 162
P14158 Physalien 650.1559 651.1582 162
P21337 3-(9-Adeninyl)propionic acid. 207.0794 208.0868 162
P32513 Cefbuperazone 627.1640 628.1696 162
P41353 Deoxyharringtonine 515.2462 516.2526 162
P41829 Renieramycin R 605.2383 606.2458 162
P49182 Noberastine 311.1785 312.1827 162

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G163100 hypothetical protein AT5G52810:AT5G52810:NAD(P)-binding Rossmann-fold superfamily protein 0
Glyma.20G163200 hypothetical protein AT5G52830:WRKY27:WRKY DNA-binding protein 27 0
Glyma.20G163300 hypothetical protein AT5G52850:AT5G52850:Pentatricopeptide repeat (PPR) superfamily protein 0
Glyma.20G163400 hypothetical protein AT4G11810:AT4G11810:Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein__AT1G63010:AT1G63010:Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein 0
Glyma.20G163500 hypothetical protein AT5G52860:ABCG8:ABC-2 type transporter family protein 0
Glyma.20G163600 hypothetical protein AT5G52870:MAKR5:membrane-associated kinase regulator 0
Glyma.20G163700 hypothetical protein AT4G23630:BTI1:VIRB2-interacting protein 1 0
Glyma.20G163800 hypothetical protein AT5G52880:AT5G52880:F-box family protein 0
Glyma.20G163900 hypothetical protein AT5G52882:AT5G52882:P-loop containing nucleoside triphosphate hydrolases superfamily protein 0
Glyma.20G164000 hypothetical protein AT5G52900:MAKR6:membrane-associated kinase regulator 0