Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P05765 Lycomarasmine B 277.0881 278.0973 165
P12117 Nutlin-3 580.1626 581.1677 165
P18034 276.1936 277.2003 165
P21529 Hosloppin 392.0948 393.1016 165
P22253 360.2841 361.2899 165
P22299 Pubescenine 495.2821 496.2855 165
P29912 O-Phosphoviomycin 765.2905 766.2988 165
P42723 CJ 15208 577.2763 578.2781 165
P45180 199.1326 200.1399 165
P45663 Kopsaporine 426.1785 427.1816 165

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G163100 hypothetical protein AT5G52810:AT5G52810:NAD(P)-binding Rossmann-fold superfamily protein 0
Glyma.20G163200 hypothetical protein AT5G52830:WRKY27:WRKY DNA-binding protein 27 0
Glyma.20G163300 hypothetical protein AT5G52850:AT5G52850:Pentatricopeptide repeat (PPR) superfamily protein 0
Glyma.20G163400 hypothetical protein AT4G11810:AT4G11810:Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein__AT1G63010:AT1G63010:Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein 0
Glyma.20G163500 hypothetical protein AT5G52860:ABCG8:ABC-2 type transporter family protein 0
Glyma.20G163600 hypothetical protein AT5G52870:MAKR5:membrane-associated kinase regulator 0
Glyma.20G163700 hypothetical protein AT4G23630:BTI1:VIRB2-interacting protein 1 0
Glyma.20G163800 hypothetical protein AT5G52880:AT5G52880:F-box family protein 0
Glyma.20G163900 hypothetical protein AT5G52882:AT5G52882:P-loop containing nucleoside triphosphate hydrolases superfamily protein 0
Glyma.20G164000 hypothetical protein AT5G52900:MAKR6:membrane-associated kinase regulator 0