Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P14703 Dillapional 236.0658 237.0736 195
P30058 Koraiol 222.1951 223.2018 195
P12116 o-Methylacetophenone 134.0716 135.0790 194
P16820 Petunidin 3-(6''-malonylglucoside) 564.1095 565.1176 194
P28303 Nannochelin B 754.3070 755.3117 194
P37556 807.4435 808.4480 194
P41491 677.8221 678.8305 194
P01926 Hyacinthacine A4 187.1208 188.1264 193
P06218 Repaglinide 452.2673 453.2779 193
P08723 (2R,3R,5R)-2-(S-Pantetheinyl)-carbapenam-3-carboxylate 431.1720 432.1820 193

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G163100 hypothetical protein AT5G52810:AT5G52810:NAD(P)-binding Rossmann-fold superfamily protein 0
Glyma.20G163200 hypothetical protein AT5G52830:WRKY27:WRKY DNA-binding protein 27 0
Glyma.20G163300 hypothetical protein AT5G52850:AT5G52850:Pentatricopeptide repeat (PPR) superfamily protein 0
Glyma.20G163400 hypothetical protein AT4G11810:AT4G11810:Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein__AT1G63010:AT1G63010:Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein 0
Glyma.20G163500 hypothetical protein AT5G52860:ABCG8:ABC-2 type transporter family protein 0
Glyma.20G163600 hypothetical protein AT5G52870:MAKR5:membrane-associated kinase regulator 0
Glyma.20G163700 hypothetical protein AT4G23630:BTI1:VIRB2-interacting protein 1 0
Glyma.20G163800 hypothetical protein AT5G52880:AT5G52880:F-box family protein 0
Glyma.20G163900 hypothetical protein AT5G52882:AT5G52882:P-loop containing nucleoside triphosphate hydrolases superfamily protein 0
Glyma.20G164000 hypothetical protein AT5G52900:MAKR6:membrane-associated kinase regulator 0